Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6053

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6052: 14420 - Hypothetical Protein, at 1525675 to 1528680 14420 mRNA_6053: 14421 - Hypothetical Protein, at 1528977 to 1530261 14421 mRNA_6054: 14422 - Hypothetical Protein, at 1530562 to 1531285 14422

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,527,984 + 14420 mRNA_6052 0.77 -1.1
1,527,991 - 14420 mRNA_6052 0.77 0.5
1,528,215 + 14420 mRNA_6052 0.84 -2.1
1,528,322 + 14420 mRNA_6052 0.88 0.8
1,528,454 - -0.4
1,528,745 + 0.5
1,528,901 - 0.0
1,528,909 + -0.1
1,528,930 - -0.3
1,528,930 - -1.3
1,528,931 - 0.3
1,529,034 - -3.5
1,529,059 + -0.6
1,529,143 + 14421 mRNA_6053 0.13 0.2
1,529,143 - 14421 mRNA_6053 0.13 -1.0
1,529,143 + 14421 mRNA_6053 0.13 -1.1
1,529,166 - 14421 mRNA_6053 0.15 1.4
1,529,180 + 14421 mRNA_6053 0.16 -1.2
1,529,184 + 14421 mRNA_6053 0.16 -0.1
1,529,308 - 14421 mRNA_6053 0.26 0.5
1,529,316 - 14421 mRNA_6053 0.26 0.8
1,529,334 + 14421 mRNA_6053 0.28 0.6
1,529,464 - 14421 mRNA_6053 0.38 1.0
1,529,568 - 14421 mRNA_6053 0.46 0.1
1,529,652 + 14421 mRNA_6053 0.53 -0.5
1,529,769 + 14421 mRNA_6053 0.62 -0.3
1,529,773 - 14421 mRNA_6053 0.62 -0.4
1,529,900 - 14421 mRNA_6053 0.72 0.3
1,529,905 - 14421 mRNA_6053 0.72 -0.9
1,529,909 - 14421 mRNA_6053 0.73 1.5
1,529,940 - 14421 mRNA_6053 0.75 -0.3
1,529,945 + 14421 mRNA_6053 0.75 0.0
1,529,982 - 14421 mRNA_6053 0.78 1.6
1,530,038 - 14421 mRNA_6053 0.83 -1.3
1,530,080 - 14421 mRNA_6053 0.86 -1.0
1,530,157 - 1.1
1,530,162 + -0.3
1,530,173 - 0.3
1,530,199 - -1.8
1,530,200 - 0.3
1,530,203 - -0.9
1,530,323 - 0.6
1,530,336 + -0.6
1,530,341 + 0.6
1,530,347 - -0.4
1,530,630 + -0.8
1,530,639 - 14422 mRNA_6054 0.11 0.8
1,530,649 - 14422 mRNA_6054 0.12 1.2
1,530,666 + 14422 mRNA_6054 0.14 0.2
1,530,757 - 14422 mRNA_6054 0.27 1.4
1,530,777 - 14422 mRNA_6054 0.30 1.8
1,530,923 - 14422 mRNA_6054 0.50 -0.2
1,530,980 - 14422 mRNA_6054 0.58 -1.8
1,531,033 - 14422 mRNA_6054 0.65 -1.0
1,531,040 + 14422 mRNA_6054 0.66 0.0
1,531,056 + 14422 mRNA_6054 0.68 0.6
1,531,111 + 14422 mRNA_6054 0.76 1.2
1,531,118 + 14422 mRNA_6054 0.77 0.5
1,531,216 + 1.7
1,531,239 + -1.1
1,531,248 - -2.2