Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5985

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5984: 14352 - Hypothetical Protein, at 1380617 to 1381762 14352 mRNA_5985: 14353 - Hypothetical Protein, at 1382112 to 1383280 14353 mRNA_5986: 14354 - Hypothetical Protein, at 1383321 to 1384747 14354

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,381,118 - 14352 mRNA_5984 0.44 0.4
1,381,124 + 14352 mRNA_5984 0.44 1.5
1,381,320 - 14352 mRNA_5984 0.61 0.2
1,381,680 + -0.2
1,381,738 + 0.6
1,381,741 + 2.0
1,381,866 - 0.4
1,381,880 + 0.1
1,382,005 - 0.0
1,382,176 - 0.3
1,382,342 + 14353 mRNA_5985 0.20 0.6
1,382,656 + 14353 mRNA_5985 0.47 -0.9
1,382,763 - 14353 mRNA_5985 0.56 -0.3
1,382,763 + 14353 mRNA_5985 0.56 -0.8
1,382,779 + 14353 mRNA_5985 0.57 -0.4
1,382,803 - 14353 mRNA_5985 0.59 0.9
1,382,916 + 14353 mRNA_5985 0.69 0.1
1,383,096 + 14353 mRNA_5985 0.84 0.0
1,383,405 + 0.6
1,383,532 + 14354 mRNA_5986 0.15 0.2
1,383,693 + 14354 mRNA_5986 0.26 0.3
1,383,800 - 14354 mRNA_5986 0.34 0.0
1,383,956 - 14354 mRNA_5986 0.44 0.4
1,383,956 - 14354 mRNA_5986 0.44 0.3
1,383,966 + 14354 mRNA_5986 0.45 2.1
1,383,966 + 14354 mRNA_5986 0.45 -1.0
1,383,979 - 14354 mRNA_5986 0.46 0.5
1,384,230 + 14354 mRNA_5986 0.64 0.4
1,384,236 - 14354 mRNA_5986 0.64 -0.8