Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5950

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5950: 14318 - KOG2130 Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain, at 1310261 to 1312291 14318 mRNA_5951: 14319 - HMMPfam-Peptidase of plants and bacteria-PF04450, at 1312489 to 1313415 14319

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
1,309,452 + -0.7
1,309,513 + -0.6
1,309,607 + -0.0
1,309,607 + 0.3
1,309,730 + 2.5
1,309,912 - 1.0
1,310,065 - -0.8
1,310,068 + -0.2
1,310,080 + 0.1
1,310,082 - -1.0
1,310,084 + -1.1
1,310,250 + -0.5
1,310,337 - -2.1
1,310,487 + 14318 mRNA_5950 0.11 0.1
1,310,531 - 14318 mRNA_5950 0.13 -0.9
1,310,796 - 14318 mRNA_5950 0.26 1.8
1,310,812 + 14318 mRNA_5950 0.27 1.5
1,310,938 - 14318 mRNA_5950 0.33 -0.3
1,310,961 + 14318 mRNA_5950 0.34 0.6
1,310,977 + 14318 mRNA_5950 0.35 1.1
1,311,054 + 14318 mRNA_5950 0.39 -1.7
1,311,077 - 14318 mRNA_5950 0.40 0.6
1,311,227 - 14318 mRNA_5950 0.48 2.1
1,311,229 - 14318 mRNA_5950 0.48 -0.2
1,311,236 + 14318 mRNA_5950 0.48 -0.5
1,311,533 + 14318 mRNA_5950 0.63 -1.2
1,311,635 + 14318 mRNA_5950 0.68 -1.2
1,311,829 + 14318 mRNA_5950 0.77 1.0
1,312,044 - 14318 mRNA_5950 0.88 0.4
1,312,054 + 14318 mRNA_5950 0.88 1.8
1,312,113 + -3.4
1,312,130 + 0.5
1,312,401 + -0.3
1,312,429 + -2.3
1,312,434 + 1.7
1,312,615 - 14319 mRNA_5951 0.14 -0.1
1,312,701 - 14319 mRNA_5951 0.23 0.8
1,312,708 - 14319 mRNA_5951 0.24 1.8
1,312,729 - 14319 mRNA_5951 0.26 -2.1
1,312,762 + 14319 mRNA_5951 0.29 -0.1
1,312,810 + 14319 mRNA_5951 0.35 0.1
1,312,852 + 14319 mRNA_5951 0.39 -0.4
1,313,047 - 14319 mRNA_5951 0.60 1.2
1,313,129 + 14319 mRNA_5951 0.69 -1.0