Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5838

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5835: 14203 - Hypothetical Protein, at 1051444 to 1053111 14203 mRNA_5837: 14205 - Hypothetical Protein, at 1053180 to 1053560 14205 mRNA_5838: 14206 - Hypothetical Protein, at 1053748 to 1057363 14206 mRNA_5839: 14207 - KOG1485 Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily), at 1057986 to 1059874 14207

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,052,992 - 0.7
1,053,011 - 2.2
1,053,020 - 2.5
1,053,134 - 0.2
1,053,176 - 0.5
1,053,302 - 14205 mRNA_5837 0.32 0.7
1,053,302 + 14205 mRNA_5837 0.32 -0.5
1,053,316 - 14205 mRNA_5837 0.36 -1.1
1,053,331 - 14205 mRNA_5837 0.40 1.2
1,053,455 - 14205 mRNA_5837 0.72 -0.8
1,053,597 - 0.5
1,053,773 - -0.5
1,054,005 + 0.3
1,054,455 + 14206 mRNA_5838 0.20 -1.3
1,056,176 - 14206 mRNA_5838 0.67 -2.2
1,056,330 - 14206 mRNA_5838 0.71 -4.4
1,056,333 - 14206 mRNA_5838 0.71 -2.2
1,056,350 - 14206 mRNA_5838 0.72 -4.2
1,056,495 + 14206 mRNA_5838 0.76 -2.7
1,056,499 - 14206 mRNA_5838 0.76 -2.7
1,056,511 + 14206 mRNA_5838 0.76 -2.9
1,056,645 + 14206 mRNA_5838 0.80 -0.6
1,056,658 + 14206 mRNA_5838 0.80 -3.7
1,056,663 - 14206 mRNA_5838 0.81 -1.1
1,056,782 - 14206 mRNA_5838 0.84 0.4
1,056,943 - 14206 mRNA_5838 0.88 -0.2
1,057,224 - -0.3
1,057,232 + -1.0
1,057,245 - -0.6
1,057,255 + -1.7
1,057,258 - 1.2
1,057,258 - 0.7
1,057,261 + 1.0
1,057,267 - 0.5
1,057,371 + 0.7
1,057,378 + -0.3
1,057,381 + -0.4
1,057,388 + 1.1
1,057,425 + 0.5
1,057,449 - -1.9
1,057,643 - 0.5
1,057,731 + -0.3