Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5761

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5760: 14128 - K14015 NPLOC4, NPL4 nuclear protein localization protein 4 homolog, at 878316 to 881175 14128 mRNA_5761: 14129 - K14997 SLC38A11 solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 11, at 881466 to 883589 14129 mRNA_5762: 14130 - SUPERFAMILY--SSF47095, at 884263 to 884826 14130

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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881,224 - 1.0
881,295 - -0.2
881,359 - -0.0
881,372 + 0.8
881,379 - -4.5
881,433 - 0.0
881,893 + 14129 mRNA_5761 0.20 1.6
881,896 - 14129 mRNA_5761 0.20 0.5
882,061 + 14129 mRNA_5761 0.28 0.6
882,090 - 14129 mRNA_5761 0.29 -1.2
882,655 - 14129 mRNA_5761 0.56 0.5
882,682 + 14129 mRNA_5761 0.57 0.1
882,817 - 14129 mRNA_5761 0.64 0.3
883,024 + 14129 mRNA_5761 0.73 -1.4
883,126 - 14129 mRNA_5761 0.78 0.3
883,280 - 14129 mRNA_5761 0.85 1.1
883,283 - 14129 mRNA_5761 0.86 -0.9
883,397 - -0.2
883,460 - 0.6
883,549 - 0.3
883,550 + -0.2
883,562 + 2.1
883,566 + -0.1
883,704 - 0.7
883,706 - -2.8
883,713 - -0.3
883,730 - 0.2
883,733 - 0.4
883,735 - 0.1
883,743 + 0.7
883,745 + -1.3
883,748 + -1.5
883,748 + 1.1
883,748 - 0.0
883,753 - 0.8
883,768 + -0.5
883,835 + -0.4
883,878 - -0.4
884,054 - -0.2
884,252 + 0.1
884,298 - 1.3
884,333 + 14130 mRNA_5762 0.12 -0.8
884,496 - 14130 mRNA_5762 0.41 -0.3