Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5755

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5755: 14123 - HMMPfam-PB1 domain-PF00564,SUPERFAMILY--SSF54277, at 868685 to 870428 14123 mRNA_5756: 14124 - HMMPfam-Myb-like DNA-binding domain-PF00249,ProSiteProfiles-Myb-like domain profile.-PS50090,ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689, at 870782 to 872057 14124

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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867,691 - 1.7
867,713 + 0.4
867,722 + -0.9
867,727 - 0.5
867,731 + 0.5
867,741 - -0.1
867,741 - 0.1
867,742 + -0.2
867,742 + -0.4
867,745 + -1.6
867,746 + 0.6
867,749 + -1.3
867,750 - -0.4
867,762 - 1.2
867,766 - 2.0
867,769 + 0.4
867,880 + -1.4
867,906 + 2.1
868,162 + 1.4
868,173 - -1.3
868,203 + -0.7
868,617 + -1.6
868,777 + 0.7
868,793 + 2.3
868,796 - -0.1
868,921 + 14123 mRNA_5755 0.14 0.8
868,925 - 14123 mRNA_5755 0.14 1.6
868,927 + 14123 mRNA_5755 0.14 -0.5
868,943 - 14123 mRNA_5755 0.15 1.4
868,959 + 14123 mRNA_5755 0.16 0.5
868,973 - 14123 mRNA_5755 0.17 1.9
869,086 + 14123 mRNA_5755 0.23 0.7
869,816 - 14123 mRNA_5755 0.65 -2.1
869,818 - 14123 mRNA_5755 0.65 1.1
869,848 + 14123 mRNA_5755 0.67 0.6
869,983 - 14123 mRNA_5755 0.74 -0.4
870,019 - 14123 mRNA_5755 0.76 1.7
870,246 - 14123 mRNA_5755 0.90 0.9
870,268 + 0.1
870,308 - -0.1
870,414 - -0.3
870,535 - 1.4
870,682 - -2.7
870,722 + -0.2
870,724 + -0.2
870,726 + -0.2
870,751 + 0.4
870,787 + 2.0
870,876 + 1.0
870,881 - 1.1
871,154 - 14124 mRNA_5756 0.29 -1.9