Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5750

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5749: 14117 - K14863 YTM1, WDR12 ribosome biogenesis protein YTM1, at 850865 to 852979 14117 mRNA_5750: 14118 - KOG2306 Uncharacterized conserved protein, at 853248 to 855227 14118 mRNA_5751: 14119 - K14708 SLC26A11 solute carrier family 26 (sodium-independent sulfate anion transporter), member 11, at 855663 to 858482 14119

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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853,064 + -0.1
853,075 + 1.2
853,083 - 0.8
853,100 + 1.1
853,372 - -1.2
853,374 + 1.6
853,384 + 2.3
853,499 + 14118 mRNA_5750 0.13 -0.4
853,826 + 14118 mRNA_5750 0.29 0.4
853,827 - 14118 mRNA_5750 0.29 0.5
853,976 - 14118 mRNA_5750 0.37 0.0
854,240 - 14118 mRNA_5750 0.50 0.2
854,280 + 14118 mRNA_5750 0.52 -0.1
854,573 + 14118 mRNA_5750 0.67 0.1
854,934 + 14118 mRNA_5750 0.85 0.5
854,986 - 14118 mRNA_5750 0.88 0.9
855,101 + 1.9
855,114 - 0.0
855,129 + 0.6
855,143 + -0.6
855,145 + 0.7
855,153 - -0.4
855,424 - 0.1
855,433 + 1.7
855,439 - 0.2
855,483 + -1.8
855,577 + -0.3
855,587 + 0.5
855,903 - -1.0
856,082 - 14119 mRNA_5751 0.15 -0.3
856,129 - 14119 mRNA_5751 0.17 0.3