Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5742

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5742: 14110 - BLAST spindle pole body protein [Moesziomyces antarcticus T..., at 827493 to 828317 14110 mRNA_5743: 14111 - K05672 ABCC12 ATP-binding cassette, subfamily C (CFTR/MRP), member 12, at 828542 to 833992 14111

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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826,503 - -0.4
826,740 - 1.4
826,978 - 1.3
826,979 + 1.1
827,212 + -0.3
827,231 - -0.5
827,257 + -0.7
827,258 + 1.7
827,261 + 0.6
827,288 - -0.2
827,330 + 0.3
827,352 + -0.2
827,353 + -0.4
827,389 + 0.6
827,399 + 0.0
827,400 - -1.0
827,401 - -0.3
827,404 - -1.0
827,410 + -0.8
827,414 + -0.1
827,434 + -0.2
827,533 - -0.7
827,545 + -1.6
827,547 - 0.0
827,547 - -1.1
827,547 - 0.8
827,549 - 2.4
827,585 - 14110 mRNA_5742 0.11 1.0
827,602 - 14110 mRNA_5742 0.13 -1.5
827,647 + 14110 mRNA_5742 0.19 -0.4
827,711 - 14110 mRNA_5742 0.26 1.4
828,569 - -0.6
828,719 + 3.0
828,721 + -0.0
828,894 + 0.8
829,303 + 14111 mRNA_5743 0.14 0.3