Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5707

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5707: 14075 - Hypothetical Protein, at 736463 to 742238 14075 mRNA_5708: 14076 - KOG4774 Uncharacterized conserved protein, at 743079 to 743817 14076

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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735,501 + 0.6
735,512 + -1.9
735,820 + 0.5
735,937 + -0.3
736,516 - -1.1
736,523 + -0.8
736,560 + 0.8
736,724 + 0.8
736,974 - -1.1
737,434 + 14075 mRNA_5707 0.17 -1.2
737,951 - 14075 mRNA_5707 0.26 0.8
738,261 - 14075 mRNA_5707 0.31 0.7
738,434 + 14075 mRNA_5707 0.34 0.3
738,457 - 14075 mRNA_5707 0.35 -0.5
738,556 - 14075 mRNA_5707 0.36 0.6
738,571 + 14075 mRNA_5707 0.36 -0.4
738,708 - 14075 mRNA_5707 0.39 0.9
738,722 + 14075 mRNA_5707 0.39 -0.3
738,943 - 14075 mRNA_5707 0.43 -0.3
739,002 - 14075 mRNA_5707 0.44 0.2
739,751 + 14075 mRNA_5707 0.57 -0.4
739,768 - 14075 mRNA_5707 0.57 -0.1
739,953 - 14075 mRNA_5707 0.60 0.4
739,963 + 14075 mRNA_5707 0.61 -0.6
739,974 - 14075 mRNA_5707 0.61 0.1
740,008 - 14075 mRNA_5707 0.61 -1.2
740,324 + 14075 mRNA_5707 0.67 -0.6
740,397 - 14075 mRNA_5707 0.68 0.1
741,321 - 14075 mRNA_5707 0.84 -0.4
741,382 - 14075 mRNA_5707 0.85 1.0
741,453 - 14075 mRNA_5707 0.86 -0.2
741,757 + 0.2
741,824 - -0.9
742,051 - 0.1
742,185 - 0.5
742,271 + 2.5
742,393 + -1.1
742,438 - 1.4
742,556 - 1.3
742,559 + -0.5
742,582 + -0.6
742,602 + 1.3
742,717 + 2.5
742,723 - -0.3
742,744 + 2.0
742,761 - 0.5
742,860 - -0.0