Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5673

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5672: 14040 - HMMPfam-Putative methyltransferase-PF10294,SUPERFAMILY--SSF53335, at 661581 to 662502 14040 mRNA_5673: 14041 - Hypothetical Protein, at 663280 to 665489 14041 mRNA_5674: 14042 - K14560 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3, at 666180 to 667115 14042

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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662,521 - -0.2
662,725 + 1.0
662,809 + -0.5
662,823 + -1.3
662,827 + -0.4
662,848 - -0.1
662,854 + 0.3
662,894 - -1.4
662,920 + 1.9
662,922 - -0.2
662,928 + 0.2
662,944 - -1.2
662,991 + -0.1
662,992 - 0.1
662,998 + -0.2
663,005 + 0.5
663,007 + -1.7
663,008 + -0.0
663,011 + -0.8
663,016 + -0.4
663,021 - -0.3
663,067 + 0.4
663,073 + -1.0
663,183 + -1.3
663,330 + -0.9
663,730 - 14041 mRNA_5673 0.20 0.8
664,070 + 14041 mRNA_5673 0.36 0.1
664,217 - 14041 mRNA_5673 0.42 0.9
664,619 + 14041 mRNA_5673 0.61 -0.3
664,763 + 14041 mRNA_5673 0.67 -0.1
664,794 - 14041 mRNA_5673 0.69 -1.0
665,075 - 14041 mRNA_5673 0.81 -1.0
665,347 + 1.0
665,357 + 1.0
665,444 + 0.3
665,583 - 0.1
665,634 + 0.1
665,760 + 0.8
665,886 + -0.1
665,902 + -0.2
666,050 - -0.1
666,065 - -0.3