Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5660

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5659: 14027 - KOG2422 Uncharacterized conserved protein, at 620797 to 623499 14027 mRNA_5660: 14028 - Hypothetical Protein, at 623646 to 625624 14028 mRNA_5661: 14029 - K15151 MED10, NUT2 mediator of RNA polymerase II transcription subunit 10, at 626154 to 626959 14029

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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622,867 + 14027 mRNA_5659 0.77 -0.4
622,957 - 14027 mRNA_5659 0.80 -0.0
623,688 - 0.8
623,699 + -0.1
623,704 + -0.1
623,713 + -0.1
623,722 - -0.6
623,819 - -0.1
624,235 + 14028 mRNA_5660 0.30 -0.5
624,239 - 14028 mRNA_5660 0.30 0.0
624,358 - 14028 mRNA_5660 0.36 -0.0
624,546 + 14028 mRNA_5660 0.45 0.9
624,709 - 14028 mRNA_5660 0.54 0.7
625,550 - 0.3
625,581 - 0.4
625,694 - -0.2
625,710 + -0.7
625,990 + 1.0