Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5623

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5622: 13990 - K00849 galK galactokinase, at 531659 to 534063 13990 mRNA_5623: 13991 - KOG3393 Predicted membrane protein, at 534281 to 535136 13991 mRNA_5624: 13992 - KOG1611 Predicted short chain-type dehydrogenase, at 535753 to 536555 13992

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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533,322 - 13990 mRNA_5622 0.69 0.6
533,563 + 13990 mRNA_5622 0.79 0.8
533,727 + 13990 mRNA_5622 0.86 -2.9
534,012 + -0.4
534,155 + -0.1
534,158 - -1.6
534,346 - -0.1
534,423 - 13991 mRNA_5623 0.17 0.2
534,738 - 13991 mRNA_5623 0.53 0.9
534,914 - 13991 mRNA_5623 0.74 0.8
534,951 - 13991 mRNA_5623 0.78 -0.1
534,987 + 13991 mRNA_5623 0.82 0.0
535,219 - -0.3
535,355 + -0.3
535,365 + -0.8
535,388 + 1.7
535,444 + -1.6
535,570 + -0.1