Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5618

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5617: 13985 - BLAST beta-flanking protein [Kwoniella dejecticola CBS ..., at 522586 to 523883 13985 mRNA_5618: 13986 - K09866 AQP4 aquaporin-4, at 524423 to 526190 13986 mRNA_5619: 13987 - K09885 AQPF aquaporin rerated protein, other eukaryote, at 526532 to 528365 13987

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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523,728 + 13985 mRNA_5617 0.88 1.7
523,832 - 1.6
523,985 - 0.0
524,050 + 0.7
524,100 - 0.8
524,192 + 1.8
524,544 + -1.0
524,665 - 13986 mRNA_5618 0.14 0.3
524,682 - 13986 mRNA_5618 0.15 0.0
524,810 + 13986 mRNA_5618 0.22 -0.6
525,108 + 13986 mRNA_5618 0.39 -1.2
525,135 + 13986 mRNA_5618 0.40 2.0
525,372 - 13986 mRNA_5618 0.54 -2.3
525,712 + 13986 mRNA_5618 0.73 -0.1
526,607 + 0.1