Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5614

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5613: 13981 - K03035 PSMD12, RPN5 26S proteasome regulatory subunit N5, at 512639 to 514652 13981 mRNA_5614: 13982 - BLAST Zinc finger protein DZIP1L [Rhizoctonia solani], at 515411 to 519507 13982 mRNA_5615: 13983 - HMMPfam-GRF zinc finger-PF06839, at 519944 to 520866 13983

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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514,677 + -1.1
514,684 + 0.4
516,086 + 13982 mRNA_5614 0.16 0.6
516,617 + 13982 mRNA_5614 0.29 2.0
516,749 - 13982 mRNA_5614 0.33 2.6
516,790 + 13982 mRNA_5614 0.34 -0.5
517,426 + 13982 mRNA_5614 0.49 1.7
517,580 + 13982 mRNA_5614 0.53 0.0
517,857 + 13982 mRNA_5614 0.60 1.2
517,981 - 13982 mRNA_5614 0.63 1.7
518,294 - 13982 mRNA_5614 0.70 0.2
518,411 + 13982 mRNA_5614 0.73 -1.5
518,970 - 13982 mRNA_5614 0.87 -0.1
519,032 - 13982 mRNA_5614 0.88 0.5
519,308 + 0.0
519,418 + 0.9
519,634 + -1.4
519,928 + 0.1
520,219 - 13983 mRNA_5615 0.30 -0.3
520,389 + 13983 mRNA_5615 0.48 -0.7
520,442 - 13983 mRNA_5615 0.54 -0.1