Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5591

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5591: 13959 - K11182 AOC1, ABP1 diamine oxidase, at 458129 to 461343 13959 mRNA_5592: 13960 - HMMPfam-Alcohol acetyltransferase-PF07247,SUPERFAMILY--SSF52777, at 461599 to 463064 13960

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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457,260 + -0.7
457,327 + -1.0
457,332 + -1.2
457,442 - 0.2
457,454 - 0.6
457,465 + 0.6
457,468 + -0.9
457,596 + 0.3
457,642 + 0.6
457,706 + 1.1
457,757 - 2.7
457,909 - 0.3
457,998 - 0.5
458,023 + -1.5
458,024 - 0.1
458,051 - 2.0
458,055 - 0.3
458,058 + 2.1
459,071 - 13959 mRNA_5591 0.29 0.4
459,203 + 13959 mRNA_5591 0.33 0.6
459,203 + 13959 mRNA_5591 0.33 0.3
459,226 + 13959 mRNA_5591 0.34 -3.4
459,335 - 13959 mRNA_5591 0.38 0.4
459,384 + 13959 mRNA_5591 0.39 -1.8
459,390 - 13959 mRNA_5591 0.39 -1.5
459,777 - 13959 mRNA_5591 0.51 0.7
459,795 + 13959 mRNA_5591 0.52 1.1
460,080 - 13959 mRNA_5591 0.61 -0.1
460,085 + 13959 mRNA_5591 0.61 0.9
460,492 - 13959 mRNA_5591 0.73 -0.0
460,521 - 13959 mRNA_5591 0.74 1.1
460,954 - 13959 mRNA_5591 0.88 1.3
461,214 - -0.2
461,232 - 0.1
461,497 + -1.3
461,497 + -1.6
461,562 - -0.2
461,686 - -0.6
461,697 - -1.8
461,953 - 13960 mRNA_5592 0.24 -1.4
462,286 - 13960 mRNA_5592 0.47 -0.2
462,330 + 13960 mRNA_5592 0.50 -2.1