Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5585

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5584: 13952 - K14780 DHX37, DHR1 ATP-dependent RNA helicase DHX37/DHR1, at 434778 to 438176 13952 mRNA_5585: 13953 - HMMPfam-PB1 domain-PF00564,SUPERFAMILY--SSF54277, at 438946 to 439812 13953

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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438,235 + 0.5
438,536 - 0.7
438,537 + -0.1
438,687 + -0.4
438,734 + 1.9
438,852 + -1.4
439,578 - 13953 mRNA_5585 0.73 -0.5
439,590 + 13953 mRNA_5585 0.74 0.9
439,714 - 13953 mRNA_5585 0.89 1.3
439,730 + -2.0
439,738 - 0.4
439,895 + -0.7
439,895 + -1.4
440,058 + -2.4
440,084 - -1.1
440,098 + -0.3
440,129 - 0.0
440,166 - -1.2
440,205 + 0.7
440,208 + 0.9
440,212 - -0.2
440,237 - 0.6
440,238 - 2.0
440,242 - 0.7
440,373 - 2.2
440,374 - -0.9
440,436 - 0.5
440,441 + 0.2
440,451 - 0.6
440,463 - 2.0
440,560 - 0.4
440,566 - -2.0
440,572 - 0.5
440,587 - 1.7
440,591 - -1.4
440,593 - -0.1
440,598 + 0.8
440,750 + 0.5
440,781 - 0.1