Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5534

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5533: 13901 - Hypothetical Protein, at 314025 to 315738 13901 mRNA_5534: 13902 - K18798 AFG1, LACE1 peroxisome-assembly ATPase, at 315936 to 317983 13902 mRNA_5535: 13903 - K15305 VAC14, TAX1BP2 vacuole morphology and inheritance protein 14, at 318348 to 322384 13903

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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315,832 + -0.4
315,836 + -1.7
315,843 + 2.0
315,973 - -1.2
316,083 - -1.5
316,107 + 0.5
316,119 - -0.3
316,121 + -0.0
316,550 + 13902 mRNA_5534 0.30 1.0
316,830 + 13902 mRNA_5534 0.44 0.7
317,116 - 13902 mRNA_5534 0.58 0.2
317,237 - 13902 mRNA_5534 0.64 -1.7
317,258 + 13902 mRNA_5534 0.65 -2.1
317,302 + 13902 mRNA_5534 0.67 -0.8
317,541 + 13902 mRNA_5534 0.78 -1.0
317,550 - 13902 mRNA_5534 0.79 0.5
317,558 + 13902 mRNA_5534 0.79 -0.7
317,562 + 13902 mRNA_5534 0.79 -0.8
317,699 + 13902 mRNA_5534 0.86 -0.9
317,722 - 13902 mRNA_5534 0.87 -1.5
317,741 - 13902 mRNA_5534 0.88 0.2
317,855 + -0.9
318,012 + 2.0
318,028 - -0.1
318,029 + -0.3
318,033 + 0.2
318,042 + -1.6
318,046 + -1.0
318,173 - 0.1
318,304 - 0.4
318,310 + 0.6
318,313 + -1.0
318,313 + 1.5
318,562 + 0.5