Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5506

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5506: 13874 - KOG2504 Monocarboxylate transporter, at 257318 to 259586 13874 mRNA_5507: 13875 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 259685 to 261151 13875

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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256,360 + -0.8
256,530 + -2.2
256,793 + 0.3
256,951 - -1.8
257,091 + -0.6
257,384 - 0.3
257,404 + 0.9
257,486 - 0.3
257,539 - -0.2
257,558 - 13874 mRNA_5506 0.11 -0.9
257,656 + 13874 mRNA_5506 0.15 1.0
257,700 - 13874 mRNA_5506 0.17 0.6
258,139 - 13874 mRNA_5506 0.36 1.1
258,280 + 13874 mRNA_5506 0.42 -1.9
258,553 - 13874 mRNA_5506 0.54 -2.2
258,821 + 13874 mRNA_5506 0.66 1.1
259,182 - 13874 mRNA_5506 0.82 1.5
259,451 + -0.3
259,895 - 13875 mRNA_5507 0.14 -1.7
260,510 + 13875 mRNA_5507 0.56 -1.6