Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5457

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5457: 13825 - KOG2533 Permease of the major facilitator superfamily, at 132935 to 135021 13825 mRNA_5458: 13826 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 135775 to 137466 13826

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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132,179 + 0.2
132,570 + 0.9
132,681 + 0.3
132,729 + -2.1
132,731 - -2.2
132,974 + 0.5
133,257 + 13825 mRNA_5457 0.15 0.3
133,276 + 13825 mRNA_5457 0.16 1.0
133,406 - 13825 mRNA_5457 0.23 1.4
133,629 - 13825 mRNA_5457 0.33 0.7
133,862 - 13825 mRNA_5457 0.44 0.7
134,425 + 13825 mRNA_5457 0.71 -0.0
134,559 + 13825 mRNA_5457 0.78 -0.6
134,692 - 13825 mRNA_5457 0.84 1.4
134,700 + 13825 mRNA_5457 0.85 0.8
134,846 + -0.0
134,958 - 1.1
134,994 - -0.5
134,994 + 0.2
135,005 - 0.1
135,112 - -0.4
135,133 - -0.4
135,133 - 2.3
135,142 + 0.6
135,152 - 0.9
135,155 + -1.1
135,160 + -1.3
135,165 + -0.3
135,192 - -1.5
135,210 + 2.5
135,228 - -0.0
135,238 - -0.5
135,271 - -0.8
135,284 + -0.7
135,285 - -0.4
135,287 + -0.7
135,290 - 1.1
135,299 - 1.0
135,310 - -0.6
135,319 + -0.9
135,319 + 1.4
135,327 - -0.7
135,354 - 3.2
135,446 - 0.3
135,446 - -0.5
135,464 + 2.6
135,464 + 0.3
135,485 - -1.2
135,486 - 0.8
135,486 - -0.8
135,489 + 0.5
135,493 + 0.3
135,506 + -0.3
135,510 + -0.0
135,511 + 0.7
135,560 - 0.0
135,560 - 0.6
135,570 + 0.9
135,571 - 0.8
135,577 - 0.3
135,580 + -3.0
135,581 + 1.1
135,586 + 0.6
135,586 - -0.4
135,607 - -2.3
135,616 + -3.0
135,627 + 1.4
135,632 - -0.6
135,647 - 0.3
135,654 + 0.5
135,656 + -0.2
135,682 - 1.1
135,688 + -0.5
135,724 + -0.5
135,728 + -0.1
135,818 - 0.4
135,825 - -0.3
135,864 - -3.3
135,929 - -0.6
135,944 - -1.2
135,985 + 13826 mRNA_5458 0.12 0.7
135,990 - 13826 mRNA_5458 0.13 -0.7