Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5438

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5436: 13804 - Hypothetical Protein, at 94082 to 95346 13804 mRNA_5437: 13805 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 95349 to 95702 13805 mRNA_5438: 13806 - K06867 K06867 uncharacterized protein, at 96047 to 99541 13806 mRNA_5439: 13807 - Hypothetical Protein, at 99970 to 100789 13807

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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95,691 + 0.3
95,703 + 0.7
95,944 + -0.8
95,957 - 0.4
96,077 - 0.2
96,094 - 0.4
96,363 - -1.0
96,831 + 13806 mRNA_5438 0.22 -2.1
96,996 + 13806 mRNA_5438 0.27 -0.1
97,044 + 13806 mRNA_5438 0.29 1.7
97,302 + 13806 mRNA_5438 0.36 -1.3
97,392 + 13806 mRNA_5438 0.38 -1.5
97,414 + 13806 mRNA_5438 0.39 0.0
97,522 - 13806 mRNA_5438 0.42 -0.7
97,523 + 13806 mRNA_5438 0.42 -0.2
97,536 - 13806 mRNA_5438 0.43 -0.5
97,692 - 13806 mRNA_5438 0.47 0.2
97,809 + 13806 mRNA_5438 0.50 0.8
98,238 + 13806 mRNA_5438 0.63 -2.0
98,427 + 13806 mRNA_5438 0.68 0.2
98,561 - 13806 mRNA_5438 0.72 0.5
98,576 + 13806 mRNA_5438 0.72 -0.4
98,582 + 13806 mRNA_5438 0.73 -1.3
98,721 - 13806 mRNA_5438 0.77 -0.1
98,854 - 13806 mRNA_5438 0.80 -0.5
98,940 + 13806 mRNA_5438 0.83 1.5
98,964 - 13806 mRNA_5438 0.83 0.1
98,975 - 13806 mRNA_5438 0.84 0.9
99,163 - 13806 mRNA_5438 0.89 0.0
99,182 + 13806 mRNA_5438 0.90 -0.1
99,253 - 2.1
99,299 - 1.0
99,543 - -0.7
99,846 + 0.9
99,855 + 1.5
99,909 + -0.4
99,912 - -0.1
100,026 - 0.3
100,046 + 0.3
100,058 - 13807 mRNA_5439 0.11 0.0