Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5432

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5431: 13799 - KOG1296 Uncharacterized conserved protein, at 84428 to 85305 13799 mRNA_5432: 13800 - Hypothetical Protein, at 86010 to 86874 13800 mRNA_5433: 13801 - BLAST UPF0658 Golgi apparatus membrane protein [Termitomyce..., at 87517 to 89164 13801

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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85,068 - 13799 mRNA_5431 0.73 0.0
85,069 - 13799 mRNA_5431 0.73 0.4
85,154 + 13799 mRNA_5431 0.83 0.6
85,188 - 13799 mRNA_5431 0.87 -0.7
85,331 - -1.1
85,368 - 0.5
85,406 - 0.4
85,508 - 0.2
85,627 + 0.3
85,657 + 0.7
85,973 + 0.0
85,976 - 0.9
86,026 + 0.5
86,091 + 0.2
86,546 + 13800 mRNA_5432 0.62 0.3
86,668 - 13800 mRNA_5432 0.76 2.4
86,675 - 13800 mRNA_5432 0.77 3.0
86,675 + 13800 mRNA_5432 0.77 0.7
86,776 + 13800 mRNA_5432 0.89 0.3
86,832 + -0.0
87,750 + 13801 mRNA_5433 0.14 -0.5
87,833 - 13801 mRNA_5433 0.19 -0.6
87,861 + 13801 mRNA_5433 0.21 -1.6
87,871 + 13801 mRNA_5433 0.21 0.7