Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5347

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5346: 13714 - HMMPfam-Hamartin protein-PF04388, at 504794 to 508994 13714 mRNA_5347: 13715 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 509884 to 511420 13715

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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508,937 + -0.7
509,071 - 0.7
509,236 - 1.0
509,251 - 1.2
509,387 - -0.1
509,395 - -0.5
509,526 + 1.4
509,529 + 0.5
509,680 + 0.9
509,704 + 0.2
509,820 - -0.9
509,826 + -0.6
509,989 - -0.3
510,002 - 0.4
510,128 + 13715 mRNA_5347 0.16 0.6
510,298 - 13715 mRNA_5347 0.27 0.1
510,433 + 13715 mRNA_5347 0.36 -0.3
510,554 + 13715 mRNA_5347 0.44 0.4
510,571 - 13715 mRNA_5347 0.45 -0.3
510,716 + 13715 mRNA_5347 0.54 -0.9
510,870 - 13715 mRNA_5347 0.64 0.3
510,893 - 13715 mRNA_5347 0.66 0.8
511,040 - 13715 mRNA_5347 0.75 -1.1
511,442 - 0.2
511,465 - 0.1
511,628 - 0.5
511,643 + -2.5
511,906 - -1.2
511,914 + -0.3
512,063 + 0.3
512,192 - 1.0
512,359 - -1.7