Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5296

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5295: 13663 - Hypothetical Protein, at 381073 to 381951 13663 mRNA_5296: 13664 - Hypothetical Protein, at 382436 to 382844 13664 mRNA_5297: 13665 - Hypothetical Protein, at 383150 to 384089 13665

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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381,627 + 13663 mRNA_5295 0.63 -0.4
381,637 + 13663 mRNA_5295 0.64 0.9
381,659 + 13663 mRNA_5295 0.67 -0.2
381,661 - 13663 mRNA_5295 0.67 0.6
381,781 + 13663 mRNA_5295 0.81 -0.2
381,782 - 13663 mRNA_5295 0.81 0.6
381,796 - 13663 mRNA_5295 0.82 -0.8
381,809 + 13663 mRNA_5295 0.84 -0.7
381,812 - 13663 mRNA_5295 0.84 -0.1
381,813 - 13663 mRNA_5295 0.84 -0.5
381,820 - 13663 mRNA_5295 0.85 -0.7
381,880 - -0.3
381,933 - -0.2
381,944 - -0.2
381,955 - -0.7
381,956 + 1.0
381,967 - 1.3
382,042 - 0.1
382,093 + 1.1
382,097 + -0.1
382,103 + -1.7
382,106 + -1.2
382,114 + 2.0
382,205 - -0.4
382,232 + -0.4
382,255 - 0.1
382,276 - 0.0
382,281 + -1.4
382,353 - 0.8
382,354 + -0.3
382,379 + -0.6
382,386 + 0.4
382,561 + 13664 mRNA_5296 0.31 0.2
382,614 + 13664 mRNA_5296 0.44 0.4
382,638 - 13664 mRNA_5296 0.49 -0.2
382,656 + 13664 mRNA_5296 0.54 -2.4
382,747 + 13664 mRNA_5296 0.76 1.1
382,809 - -0.1
382,812 - -0.4
382,813 + 0.9
382,814 - -0.5
382,823 - 1.9
382,823 - -1.4
382,824 - 0.5
382,848 - 0.3
382,864 - -1.3
382,869 + -0.2
382,874 - -0.6
382,879 + -0.6
382,882 - -0.6
382,883 + -1.8
382,885 - 0.9
382,907 - -0.8
382,911 + -0.2
382,912 - 0.1
382,921 + -0.2
382,961 - -0.3
382,973 - -0.4
383,002 + 0.3
383,003 - -0.5
383,033 - -1.5
383,047 - 0.4
383,051 - 1.6
383,066 + -1.4
383,067 + 0.9
383,074 - 0.7
383,085 - -0.2
383,097 - -0.9
383,099 - -0.3
383,114 - 1.1
383,134 + -0.2
383,138 + -0.4
383,146 - 0.4
383,156 + 1.3
383,162 - -1.9
383,163 - 0.9
383,164 + 1.7
383,165 - 1.7
383,195 - 0.3
383,198 + -1.6
383,204 - -0.4
383,212 - 0.1
383,223 - -0.3
383,266 + 13665 mRNA_5297 0.12 2.0
383,276 - 13665 mRNA_5297 0.13 -0.5
383,370 - 13665 mRNA_5297 0.23 1.8
383,377 - 13665 mRNA_5297 0.24 -1.0
383,384 + 13665 mRNA_5297 0.25 0.1
383,416 - 13665 mRNA_5297 0.28 0.3
383,417 + 13665 mRNA_5297 0.28 -0.0
383,423 + 13665 mRNA_5297 0.29 -0.4
383,430 + 13665 mRNA_5297 0.30 0.6
383,535 + 13665 mRNA_5297 0.41 0.3
383,543 - 13665 mRNA_5297 0.42 0.1
383,707 + 13665 mRNA_5297 0.59 1.3
383,728 + 13665 mRNA_5297 0.61 -1.3
383,745 + 13665 mRNA_5297 0.63 -0.6