Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5286

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5285: 13653 - HMMPfam-FAD binding domain-PF01494,PRINTS-Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature-PR00420,SUPERFAMILY--SSF51905, at 358182 to 359480 13653 mRNA_5286: 13654 - Hypothetical Protein, at 359767 to 360966 13654 mRNA_5287: 13655 - KOG0835 Cyclin L, at 361446 to 362639 13655

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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359,136 - 13653 mRNA_5285 0.73 1.4
359,152 - 13653 mRNA_5285 0.75 0.6
359,269 + 13653 mRNA_5285 0.84 -1.3
359,271 - 13653 mRNA_5285 0.84 -0.1
359,440 - -0.0
359,452 + 0.5
359,583 - -1.7
359,724 - -1.0
359,780 - -0.9
359,844 + 0.3
359,995 + 13654 mRNA_5286 0.19 2.0
360,125 - 13654 mRNA_5286 0.30 0.1
360,369 + 13654 mRNA_5286 0.50 -0.2
360,639 + 13654 mRNA_5286 0.73 -2.9
360,752 + 13654 mRNA_5286 0.82 -0.6
360,862 - 0.1
360,869 - -1.2
360,872 - -1.0
360,875 + 0.4
360,875 + -0.4
360,880 + 1.4
361,029 - 0.6
361,038 + -0.2
361,221 - 0.1
361,301 + 0.5
361,340 - 1.2
361,345 + 0.1
361,354 + -0.6