Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5277

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5276: 13644 - Hypothetical Protein, at 339259 to 340241 13644 mRNA_5277: 13645 - Hypothetical Protein, at 340398 to 341217 13645 mRNA_5278: 13646 - KOG1488 Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily), at 341492 to 344533 13646

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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339,855 - 13644 mRNA_5276 0.61 0.4
339,856 - 13644 mRNA_5276 0.61 0.0
339,856 - 13644 mRNA_5276 0.61 1.2
339,861 + 13644 mRNA_5276 0.61 0.3
339,861 + 13644 mRNA_5276 0.61 -0.3
339,862 + 13644 mRNA_5276 0.61 -0.6
339,864 - 13644 mRNA_5276 0.62 0.3
339,927 + 13644 mRNA_5276 0.68 0.6
340,119 + 13644 mRNA_5276 0.87 0.2
340,313 - -0.0
340,454 + 2.6
340,479 - 0.4
340,480 - 13645 mRNA_5277 0.10 1.6
340,564 - 13645 mRNA_5277 0.20 -0.0
340,675 - 13645 mRNA_5277 0.34 1.2
340,723 - 13645 mRNA_5277 0.40 -0.5
341,050 - 13645 mRNA_5277 0.80 1.4
341,117 + 13645 mRNA_5277 0.88 -1.2
341,592 - -1.9
341,682 + 0.2
341,972 + 13646 mRNA_5278 0.16 -1.7