Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5233

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5232: 13600 - SUPERFAMILY--SSF52047, at 218691 to 220745 13600 mRNA_5233: 13601 - HMMPfam-Transmembrane amino acid transporter protein-PF01490, at 221714 to 224141 13601 mRNA_5234: 13602 - KOG0725 Reductases with broad range of substrate specificities, at 224900 to 226337 13602

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
220,761 + -0.3
220,803 + 0.7
220,809 + 0.5
220,811 - 0.1
220,937 - 1.6
220,942 - 0.1
220,948 + -0.0
220,965 - 0.5
220,965 + 0.7
220,991 + 0.7
220,993 - 0.6
221,027 + -0.8
221,043 - 0.9
221,044 + 0.6
221,062 - -0.4
221,062 - 0.0
221,064 - 0.5
221,072 - -0.7
221,075 - -0.8
221,081 - 0.1
221,094 + -1.0
221,100 - -0.6
221,101 + -0.1
221,102 - 1.2
221,103 + 1.3
221,105 + -1.7
221,106 - -1.2
221,107 + -0.9
221,123 + -1.0
221,136 + 0.5
221,145 - -0.8
221,146 + -0.0
221,152 + -0.2
221,171 + -0.6
221,179 + 1.1
221,191 - 1.0
221,203 - -0.3
221,204 - -0.3
221,217 + -0.4
221,217 - 0.2
221,219 - 0.3
221,249 + -0.5
221,253 - -0.4
221,253 - -2.0
221,295 + -0.6
221,310 - 0.3
221,318 + -0.5
221,350 + 0.5
221,362 + -0.8
221,368 - 2.0
221,370 + -0.4
221,380 + -0.9
221,381 + 1.6
221,396 + -0.6
221,398 - 1.5
221,398 + -0.4
221,405 + -0.1
221,405 + 0.5
221,411 - -1.4
221,411 + -0.7
221,411 - -2.8
221,412 - -0.5
221,415 + 0.2
221,419 + -0.2
221,419 + 1.7
221,431 + 1.0
221,460 + -0.4
221,465 - -1.2
221,477 - 1.8
221,501 + -0.1
221,508 - -0.1
221,530 + -0.1
221,535 - 2.1
221,535 + 0.9
221,540 - -4.4
221,540 + -0.1
221,540 + -0.3
221,547 + 0.4
221,548 + -3.2
221,552 - -1.1
221,552 + 1.6
221,555 - 0.8
221,555 - 0.1
221,558 + -0.7
221,683 + -2.3
221,707 + -0.6
221,710 + 1.9
221,747 - 0.3
221,805 - -0.7
221,838 - -1.4
221,843 + -0.5
221,850 - 0.2
221,948 - 3.8
222,601 - 13601 mRNA_5233 0.37 0.7
222,723 - 13601 mRNA_5233 0.42 0.3
222,877 - 13601 mRNA_5233 0.48 0.3
223,488 + 13601 mRNA_5233 0.73 -0.3
224,559 - 0.8
224,588 - -1.4
224,730 - 0.5
224,754 - -0.2
224,768 - -0.6
224,771 + -0.3
224,812 - 0.6
224,904 + 0.6
225,024 + -0.1
225,038 + 0.5
225,102 + 13602 mRNA_5234 0.14 1.6