Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5197

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5196: 13564 - K17218 sqr sulfide-quinone oxidoreductase, at 126891 to 128997 13564 mRNA_5197: 13565 - Hypothetical Protein, at 129115 to 130730 13565 mRNA_5198: 13566 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 131412 to 133498 13566

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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128,126 - 13564 mRNA_5196 0.59 -0.5
128,134 + 13564 mRNA_5196 0.59 -0.6
128,233 - 13564 mRNA_5196 0.64 -1.5
128,280 - 13564 mRNA_5196 0.66 -0.9
128,286 - 13564 mRNA_5196 0.66 0.6
128,289 + 13564 mRNA_5196 0.66 -0.2
128,292 + 13564 mRNA_5196 0.66 0.6
128,292 - 13564 mRNA_5196 0.66 -0.8
128,293 + 13564 mRNA_5196 0.67 -1.1
128,321 - 13564 mRNA_5196 0.68 -1.9
128,327 - 13564 mRNA_5196 0.68 -0.0
128,468 + 13564 mRNA_5196 0.75 -0.5
128,497 - 13564 mRNA_5196 0.76 1.7
128,593 + 13564 mRNA_5196 0.81 0.3
128,766 - 13564 mRNA_5196 0.89 -1.9
128,861 - 1.4
128,919 + 0.3
129,038 - -0.1
129,055 + 0.1
129,145 - -0.8
129,167 - -0.8
129,189 - -0.2
129,234 - 2.0
129,300 - 13565 mRNA_5197 0.11 -0.4
129,366 - 13565 mRNA_5197 0.16 0.9
129,391 - 13565 mRNA_5197 0.17 0.4
129,648 - 13565 mRNA_5197 0.33 -1.6
129,660 + 13565 mRNA_5197 0.34 0.5
129,797 - 13565 mRNA_5197 0.42 -0.5
129,812 + 13565 mRNA_5197 0.43 0.4
129,813 - 13565 mRNA_5197 0.43 0.3
129,900 + 13565 mRNA_5197 0.49 -1.6
129,966 + 13565 mRNA_5197 0.53 0.9
130,095 + 13565 mRNA_5197 0.61 0.1
130,108 - 13565 mRNA_5197 0.61 0.5
130,173 - 13565 mRNA_5197 0.65 -0.9
130,348 + 13565 mRNA_5197 0.76 -0.4
130,415 - 13565 mRNA_5197 0.80 -1.0
130,804 - 1.6
130,808 + -0.7
130,835 - 1.2
130,950 - -0.4
130,965 - -0.2
131,021 - -1.4
131,100 + -0.2
131,117 + -0.1
131,129 - -2.3
131,138 + 0.6
131,143 - 0.4
131,144 + 0.4
131,149 + -1.0
131,169 + -2.0
131,169 + 1.8
131,182 + -0.6
131,186 + 1.6
131,186 + -1.1
131,187 + -0.3
131,208 + -2.2
131,211 + 0.1
131,217 - 0.9
131,217 - -0.6
131,227 - -0.7
131,227 - 3.2
131,240 + -0.4
131,264 - -0.7
131,275 - 0.0
131,277 + 0.4
131,289 - -0.6
131,307 - -0.5
131,320 + -0.2
131,325 - 0.1
131,356 + -0.6
131,375 - -0.9
131,439 - -0.1
131,442 + -0.2
131,521 + -1.1
131,631 + 13566 mRNA_5198 0.10 0.6