Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5180

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5179: 13547 - Hypothetical Protein, at 84295 to 87162 13547 mRNA_5180: 13548 - Hypothetical Protein, at 87692 to 90433 13548 mRNA_5181: 13549 - Hypothetical Protein, at 90744 to 91309 13549

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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86,817 + 13547 mRNA_5179 0.88 0.4
86,819 - 13547 mRNA_5179 0.88 -1.0
86,831 + 13547 mRNA_5179 0.88 -0.0
87,142 + -1.0
87,270 - 0.9
87,272 + -0.9
87,284 - 0.5
87,303 + -3.3
87,429 - -1.3
87,433 - -0.4
87,437 - -0.1
87,437 - 0.5
87,439 - -0.1
87,582 + -0.6
87,587 - 1.3
87,587 - -0.8
87,590 - -0.3
87,613 - -0.1
87,742 + -2.7
87,773 - -1.1
87,908 + -0.2
88,013 - 13548 mRNA_5180 0.12 0.3
88,036 + 13548 mRNA_5180 0.13 -0.3
88,150 - 13548 mRNA_5180 0.17 -0.3
88,434 - 13548 mRNA_5180 0.27 0.2
88,580 - 13548 mRNA_5180 0.32 0.6
89,171 + 13548 mRNA_5180 0.54 1.0
89,770 - 13548 mRNA_5180 0.76 2.5
90,074 - 13548 mRNA_5180 0.87 1.0
90,373 + -1.5
90,643 + 0.7
90,965 - 13549 mRNA_5181 0.39 0.1
91,291 - 0.4
91,382 + 0.7