Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5108

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5107: 13475 - K03130 TAF5 transcription initiation factor TFIID subunit 5, at 1772311 to 1779712 13475 mRNA_5108: 13476 - BLAST V175_0103_1006-like protein [Amanita sp. 'sp-jack1'], at 1779860 to 1781501 13476 mRNA_5109: 13477 - K17605 PPP2R4, PTPA serine/threonine-protein phosphatase 2A activator, at 1781885 to 1783353 13477

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,779,422 - -2.9
1,779,591 + 1.0
1,780,159 - 13476 mRNA_5108 0.18 -1.1
1,780,160 - 13476 mRNA_5108 0.18 -0.1
1,780,456 - 13476 mRNA_5108 0.36 -2.9
1,780,598 + 13476 mRNA_5108 0.45 -1.2
1,780,867 - 13476 mRNA_5108 0.61 -0.7
1,780,875 + 13476 mRNA_5108 0.62 -2.2
1,780,938 - 13476 mRNA_5108 0.66 -2.0
1,781,046 + 13476 mRNA_5108 0.72 0.4
1,781,500 + -0.2
1,781,689 + 1.4
1,781,792 + 0.2
1,781,807 - -0.5
1,781,811 + 0.6