Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4970

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4969: 13337 - K20456 OSBP oxysterol-binding protein 1, at 1435085 to 1439408 13337 mRNA_4970: 13338 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 1439835 to 1441343 13338

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,439,114 - 1.2
1,439,117 + 0.5
1,439,128 + 2.2
1,439,137 + -0.3
1,439,179 + 0.0
1,439,280 + 1.3
1,439,280 + -4.7
1,439,351 - 0.5
1,439,415 - 0.7
1,439,564 + -0.1
1,439,606 + 0.6
1,439,721 + -0.1
1,439,838 + 0.8
1,439,865 + 0.0
1,440,294 - 13338 mRNA_4970 0.30 -0.3
1,440,728 + 13338 mRNA_4970 0.59 -0.7
1,440,905 - 13338 mRNA_4970 0.71 0.2
1,440,986 - 13338 mRNA_4970 0.76 -0.3
1,440,989 + 13338 mRNA_4970 0.76 0.1
1,441,085 + 13338 mRNA_4970 0.83 -0.3
1,441,168 - 13338 mRNA_4970 0.88 -0.5
1,441,168 - 13338 mRNA_4970 0.88 -0.6
1,441,171 - 13338 mRNA_4970 0.89 -0.4
1,441,176 + 13338 mRNA_4970 0.89 1.0
1,441,177 - 13338 mRNA_4970 0.89 0.2
1,441,177 + 13338 mRNA_4970 0.89 -0.9
1,441,181 + 13338 mRNA_4970 0.89 0.9
1,441,186 + 13338 mRNA_4970 0.90 -0.2
1,441,192 - 13338 mRNA_4970 0.90 -1.4
1,441,198 - 2.5
1,441,202 - -0.1
1,441,302 + 1.4
1,441,303 - 0.1
1,441,305 - -1.7
1,441,308 + 0.4
1,441,327 - 1.2
1,441,333 - 0.6
1,441,351 - 0.5