Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4896

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4896: 13264 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 1246200 to 1251399 13264

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,245,372 - -0.0
1,245,388 + 1.8
1,245,409 + 0.7
1,245,414 + -1.0
1,245,419 + -0.8
1,245,543 - 1.1
1,245,549 + 0.6
1,245,698 + -0.7
1,245,702 - 0.2
1,245,703 + 0.7
1,245,715 + -1.7
1,245,856 + 0.3
1,245,993 + 0.5
1,246,447 + -1.4
1,246,576 - -1.1
1,246,590 - 0.4
1,246,738 - 13264 mRNA_4896 0.10 0.1
1,246,738 - 13264 mRNA_4896 0.10 -0.7
1,247,028 + 13264 mRNA_4896 0.16 0.3
1,247,610 - 13264 mRNA_4896 0.27 -0.6
1,247,765 - 13264 mRNA_4896 0.30 0.0
1,247,769 + 13264 mRNA_4896 0.30 0.5
1,247,872 - 13264 mRNA_4896 0.32 -1.2
1,248,016 - 13264 mRNA_4896 0.35 -0.9
1,248,080 + 13264 mRNA_4896 0.36 -1.9
1,248,478 - 13264 mRNA_4896 0.44 0.4
1,248,797 + 13264 mRNA_4896 0.50 0.0
1,249,376 + 13264 mRNA_4896 0.61 2.0
1,249,652 + 13264 mRNA_4896 0.66 0.4
1,249,699 + 13264 mRNA_4896 0.67 -0.4
1,251,116 - -1.0
1,251,260 - 2.7
1,251,373 + -2.3
1,251,680 - -1.5
1,251,979 - 0.1
1,251,985 + 0.5
1,252,129 - 0.5
1,252,284 - 1.3
1,252,300 + 0.1