Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4864

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4863: 13231 - KOG0645 WD40 repeat protein, at 1168828 to 1170396 13231 mRNA_4864: 13232 - KOG0603 Ribosomal protein S6 kinase, at 1170543 to 1172403 13232 mRNA_4865: 13233 - K12860 CDC5L, CDC5, CEF1 pre-mRNA-splicing factor CDC5/CEF1, at 1173228 to 1176152 13233

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,170,428 - -0.6
1,171,274 - 13232 mRNA_4864 0.39 1.7
1,171,286 - 13232 mRNA_4864 0.40 0.6
1,171,860 - 13232 mRNA_4864 0.71 0.5
1,172,008 - 13232 mRNA_4864 0.79 2.2
1,172,288 + -0.2
1,172,313 - 0.1
1,172,443 + 0.3
1,172,460 + -1.4
1,172,463 + 0.5
1,172,466 + 0.1
1,172,467 - 0.0
1,172,467 - 0.8
1,172,468 - 0.6
1,172,469 + -0.2
1,172,476 + -0.6
1,172,477 - -0.7
1,172,479 + 0.3
1,172,487 + 0.3
1,172,488 + 0.4
1,172,497 + 2.8
1,172,507 + 0.5
1,172,510 + 0.4
1,172,510 - -0.6
1,172,595 - 0.1
1,172,624 + -0.2
1,172,644 + 1.4
1,172,726 - 1.1
1,172,735 + -1.7
1,172,740 + -1.0
1,172,740 - 0.7
1,172,773 + 1.9
1,172,923 - 0.1