Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4776

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4775: 13143 - K01724 PCBD, phhB 4a-hydroxytetrahydrobiopterin dehydratase, at 989386 to 989809 13143 mRNA_4776: 13144 - Hypothetical Protein, at 990713 to 991663 13144 mRNA_4777: 13145 - Hypothetical Protein, at 992308 to 993106 13145

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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989,745 - 13143 mRNA_4775 0.85 0.9
989,745 + 13143 mRNA_4775 0.85 -2.6
989,750 - 13143 mRNA_4775 0.86 -0.1
989,750 - 13143 mRNA_4775 0.86 -1.5
989,801 + 0.6
990,054 - 1.1
990,057 + -0.8
990,192 + 1.4
990,224 - 0.6
990,342 - -1.0
990,352 - 0.1
990,363 - 2.1
990,372 - -0.5
990,807 - -0.4
990,819 + 13144 mRNA_4776 0.11 0.8
990,821 + 13144 mRNA_4776 0.11 -2.8
990,833 + 13144 mRNA_4776 0.13 -1.1
990,940 + 13144 mRNA_4776 0.24 0.8
990,952 + 13144 mRNA_4776 0.25 -1.3
991,265 + 13144 mRNA_4776 0.58 -0.1
991,418 - 13144 mRNA_4776 0.74 1.4
991,445 + 13144 mRNA_4776 0.77 1.3
991,555 - 13144 mRNA_4776 0.89 0.4
991,717 + 0.7
991,828 - -0.2
991,835 - 1.0
991,972 - 0.6
991,980 - 0.4
991,989 - 0.0
991,990 + -0.6
992,147 - 0.3
992,281 + -0.9