Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4773

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4772: 13140 - K01874 MARS, metG methionyl-tRNA synthetase, at 981282 to 984075 13140 mRNA_4773: 13141 - KOG0254 Predicted transporter (major facilitator superfamily), at 984416 to 986874 13141 mRNA_4774: 13142 - K02998 RP-SAe, RPSA small subunit ribosomal protein SAe, at 987579 to 988756 13142

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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983,817 + 1.1
984,063 + 1.0
984,100 + 0.4
984,187 - -1.0
984,201 - -0.4
984,223 - -0.2
984,224 - 0.7
984,225 + 0.4
984,249 - 0.7
984,251 + 1.0
984,251 + 1.4
984,257 - -0.6
984,412 - 0.8
984,517 - 0.5
984,552 - 0.1
984,676 - 13141 mRNA_4773 0.11 0.5
984,713 - 13141 mRNA_4773 0.12 0.3
985,266 + 13141 mRNA_4773 0.35 -0.2
985,429 - 13141 mRNA_4773 0.41 -1.7
986,593 + 13141 mRNA_4773 0.89 -0.5
986,603 - 13141 mRNA_4773 0.89 1.7
986,917 + 1.4
987,020 - 0.7
987,190 - 0.6
987,208 - 0.3