Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4757

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4756: 13124 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047, at 935432 to 936982 13124 mRNA_4757: 13125 - Hypothetical Protein, at 937399 to 937793 13125 mRNA_4758: 13126 - HMMPfam-Autophagy-related protein 27-PF09451,SUPERFAMILY--SSF50911, at 938067 to 939280 13126

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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936,534 - 13124 mRNA_4756 0.71 0.2
936,845 + -0.0
937,028 - -1.2
937,144 + 1.9
937,218 - -0.2
937,242 - 0.1
937,534 - 13125 mRNA_4757 0.34 0.0
937,538 + 13125 mRNA_4757 0.35 0.7
937,549 - 13125 mRNA_4757 0.38 -1.5
937,550 + 13125 mRNA_4757 0.38 0.7
937,632 - 13125 mRNA_4757 0.59 0.9
937,689 - 13125 mRNA_4757 0.73 -0.3
937,704 + 13125 mRNA_4757 0.77 -0.6
937,712 + 13125 mRNA_4757 0.79 1.3
937,729 + 13125 mRNA_4757 0.84 0.7
937,729 + 13125 mRNA_4757 0.84 0.1
937,736 - 13125 mRNA_4757 0.85 0.8
937,746 + 13125 mRNA_4757 0.88 0.1
937,765 - -0.8
937,768 - -1.5
937,873 - 0.8
937,892 - 1.4
937,897 + 0.3
937,908 + 0.8
937,910 + 1.6
937,918 + -0.3
938,179 + 0.3
938,200 - 13126 mRNA_4758 0.11 -0.1
938,207 + 13126 mRNA_4758 0.12 -0.3
938,297 - 13126 mRNA_4758 0.19 0.4
938,365 + 13126 mRNA_4758 0.25 0.4
938,487 - 13126 mRNA_4758 0.35 -1.1
938,694 + 13126 mRNA_4758 0.52 -1.3