Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4744

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4744: 13112 - HMMPfam-Uncharacterized alpha/beta hydrolase domain (DUF2235)-PF09994, at 906003 to 908213 13112 mRNA_4745: 13113 - K17086 TM9SF2_4 transmembrane 9 superfamily member 2/4, at 908739 to 911438 13113

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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905,131 + -0.0
905,212 - -0.6
905,451 + 0.1
905,468 - -1.1
905,469 - -0.2
905,627 - -1.5
905,631 + -0.1
905,631 - -0.9
905,748 + -1.8
905,794 + 0.5
905,801 + -1.2
905,851 - -1.0
905,856 - 0.0
905,865 + 0.3
905,869 - -0.6
905,870 - -0.6
905,883 - -0.5
905,896 - 1.6
905,903 - -1.3
905,917 + 0.4
905,922 - -0.3
905,930 + 1.1
905,949 - 0.1
905,951 + -0.4
905,964 - -0.4
905,964 + 0.8
905,965 + -1.6
905,966 - -0.2
905,970 - -0.7
905,978 - 1.0
906,149 - 0.0
906,228 - 13112 mRNA_4744 0.10 -0.7
906,234 + 13112 mRNA_4744 0.10 -2.6
906,366 - 13112 mRNA_4744 0.16 -0.7
906,541 + 13112 mRNA_4744 0.24 0.5
906,577 + 13112 mRNA_4744 0.26 -1.0
906,654 - 13112 mRNA_4744 0.29 -1.4
906,972 + 13112 mRNA_4744 0.44 1.0
907,275 + 13112 mRNA_4744 0.58 -0.2
907,296 - 13112 mRNA_4744 0.58 -1.0
907,439 - 13112 mRNA_4744 0.65 0.6
907,514 + 13112 mRNA_4744 0.68 -2.3
907,735 + 13112 mRNA_4744 0.78 -1.5
907,773 - 13112 mRNA_4744 0.80 -2.3
907,807 - 13112 mRNA_4744 0.82 -0.3
907,816 + 13112 mRNA_4744 0.82 -0.6
907,949 + 13112 mRNA_4744 0.88 0.2
908,191 - 1.2
908,288 + 0.6
908,444 + 0.9
908,605 + -1.7
908,674 + 0.3
908,682 - -0.0
908,827 + -1.7
908,963 + -0.4
909,068 + 13113 mRNA_4745 0.12 3.9
909,151 - 13113 mRNA_4745 0.15 -0.3