Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4741

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4740: 13108 - Hypothetical Protein, at 896087 to 896524 13108 mRNA_4741: 13109 - KOG2208 Vigilin, at 896784 to 901112 13109 mRNA_4742: 13110 - SUPERFAMILY--SSF52047, at 901391 to 902457 13110

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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895,907 + 2.2
896,044 + 0.9
896,046 - 0.9
896,046 - 1.8
896,055 - -1.4
896,176 - 13108 mRNA_4740 0.20 -0.5
896,209 + 13108 mRNA_4740 0.28 0.9
896,302 + 13108 mRNA_4740 0.49 0.6
896,308 + 13108 mRNA_4740 0.50 -0.9
896,314 + 13108 mRNA_4740 0.52 -0.1
896,424 - 13108 mRNA_4740 0.77 0.8
896,447 + 13108 mRNA_4740 0.82 0.7
896,455 + 13108 mRNA_4740 0.84 -0.7
896,456 - 13108 mRNA_4740 0.84 0.2
896,475 + 13108 mRNA_4740 0.89 0.7
896,510 + 0.0
896,579 - 0.7
896,662 - 0.4
896,752 + 0.2
896,770 - -1.4
896,773 + 1.6
896,788 - -0.5
896,907 - 0.3
896,912 + -0.8
897,050 - -0.5
897,052 + -0.6
897,060 - 1.5
897,066 + 0.7
897,072 + -0.9
897,086 + -0.2
897,181 + -0.4
897,207 - 1.0
897,235 + 13109 mRNA_4741 0.10 -1.8
897,339 + 13109 mRNA_4741 0.13 -0.6
897,344 - 13109 mRNA_4741 0.13 -0.5
897,393 - 13109 mRNA_4741 0.14 -1.4
897,400 + 13109 mRNA_4741 0.14 -0.2
897,493 - 13109 mRNA_4741 0.16 -0.6
897,798 + 13109 mRNA_4741 0.23 -0.2
897,886 + 13109 mRNA_4741 0.25 -0.7
897,912 + 13109 mRNA_4741 0.26 -1.8
898,193 - 13109 mRNA_4741 0.33 -0.8
898,201 + 13109 mRNA_4741 0.33 -1.5
898,210 + 13109 mRNA_4741 0.33 0.4
898,229 - 13109 mRNA_4741 0.33 0.4
898,395 - 13109 mRNA_4741 0.37 -0.8
898,643 + 13109 mRNA_4741 0.43 -1.3
898,647 - 13109 mRNA_4741 0.43 -0.1
898,656 + 13109 mRNA_4741 0.43 -0.6
898,788 + 13109 mRNA_4741 0.46 -2.6
898,791 - 13109 mRNA_4741 0.46 -0.3
898,795 - 13109 mRNA_4741 0.46 0.7
899,096 + 13109 mRNA_4741 0.53 0.1
899,353 - 13109 mRNA_4741 0.59 -0.7
899,465 + 13109 mRNA_4741 0.62 -0.9
899,647 - 13109 mRNA_4741 0.66 -1.2
899,736 - 13109 mRNA_4741 0.68 -0.3
899,784 + 13109 mRNA_4741 0.69 -1.0
899,827 - 13109 mRNA_4741 0.70 -2.2
899,859 + 13109 mRNA_4741 0.71 1.6
899,989 - 13109 mRNA_4741 0.74 -0.6
900,048 - 13109 mRNA_4741 0.75 -0.8
900,428 + 13109 mRNA_4741 0.84 -0.6
900,595 - 13109 mRNA_4741 0.88 1.8
900,670 + 13109 mRNA_4741 0.90 -0.6
900,834 - 0.0
900,885 - -0.0
900,892 + -0.6
900,967 - -1.4
901,042 + -0.1
901,180 + 2.1
901,282 - 1.3
901,357 + -0.2
901,862 - 13110 mRNA_4742 0.44 1.6
901,928 + 13110 mRNA_4742 0.50 -0.8
901,930 - 13110 mRNA_4742 0.51 1.5