Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4733

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4732: 13100 - HMMPfam-Major intrinsic protein-PF00230,PRINTS-Major intrinsic protein family signature-PR00783,SUPERFAMILY--SSF81338, at 879432 to 880805 13100 mRNA_4733: 13101 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 881363 to 882284 13101 mRNA_4734: 13102 - Hypothetical Protein, at 883185 to 884845 13102

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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880,467 - 13100 mRNA_4732 0.75 0.5
880,817 - -1.0
881,044 - -3.0
881,045 + 0.8
881,048 + -2.9
881,086 - 0.3
881,159 - -0.5
881,164 - 0.2
881,171 - -0.9
881,184 + 0.3
881,185 + -1.7
881,225 + 1.3
881,243 + -0.5
881,257 - -0.7
881,293 - 0.4
881,428 + -0.4
881,506 - 13101 mRNA_4733 0.16 0.5
881,525 - 13101 mRNA_4733 0.18 0.5
881,791 - 13101 mRNA_4733 0.46 -1.8
881,918 - 13101 mRNA_4733 0.60 2.8
882,134 + 13101 mRNA_4733 0.84 0.7
882,358 - 0.0
882,366 - 1.3
882,384 - -1.1
882,385 + 1.5
882,413 - -0.1
882,645 - -4.2
882,823 - -0.1
882,826 + 0.2
882,829 - 0.0
882,829 + 0.1
882,833 + 0.2
882,833 + 0.6
882,837 - 0.4
882,842 + 0.3
882,843 + 0.1
882,846 + -1.0
882,846 - 1.7
882,848 + 0.2
882,923 - -0.3
882,967 + 0.6
882,987 + -0.2
883,014 + 0.3
883,111 - -1.3
883,121 + 0.6
883,122 + 1.4
883,125 + 1.4
883,125 - 0.3
883,126 - -0.6
883,130 + -0.4