Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4659

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4658: 13026 - Hypothetical Protein, at 705825 to 708792 13026 mRNA_4659: 13027 - KOG1134 Uncharacterized conserved protein, at 709545 to 713167 13027 mRNA_4660: 13028 - Interpro Transcription-silencing protein, cryptic loci regulator Clr2, at 713553 to 716343 13028

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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708,664 + -0.7
708,686 + 0.1
708,763 - 0.3
708,859 - -0.3
708,962 + 0.0
708,971 - 0.9
708,971 - -2.6
708,977 + 0.8
708,982 + -0.6
708,984 - -1.1
708,993 - 1.3
708,995 + -0.8
708,995 - 0.1
708,995 - -0.6
708,996 - -1.1
708,998 + -1.8
709,007 + 0.2
709,011 + 0.8
709,022 + 0.1
709,028 + 0.2
709,047 + -1.4
709,055 + -0.5
709,061 - -0.4
709,062 + 1.3
709,077 - 0.8
709,077 - 0.4
709,079 + 0.6
709,082 - -0.6
709,104 - -0.2
709,115 + -0.1
709,117 + -1.0
709,119 - -0.1
709,120 + -1.0
709,125 - -0.2
709,128 + -1.4
709,137 - 0.8
709,146 + 0.0
709,187 - 0.9
709,192 + -0.6
709,207 + -0.3
709,207 - -0.0
709,214 + 0.6
709,219 - -0.2
709,219 + 0.1
709,224 + -0.9
709,226 + 0.4
709,230 + -0.9
709,231 - -0.3
709,254 - 2.0
709,256 - -0.9
709,258 + 0.4
709,259 + -0.2
709,261 - -0.7
709,261 - 1.3
709,267 + 0.4
709,267 - 1.1
709,268 + 0.6
709,268 + -0.7
709,269 + 0.1
709,275 + 0.3
709,278 - 0.7
709,279 - -0.3
709,288 - -0.2
709,289 + 0.8
709,289 + -0.2
709,294 + -0.4
709,295 - -1.2
709,305 + -0.7
709,306 - -0.0
709,307 - -0.3
709,310 - -1.8
709,311 - 1.2
709,312 + 0.7
709,336 + 0.1
709,419 - -0.3
709,452 - 1.1
710,141 - 13027 mRNA_4659 0.16 -0.9
711,453 - 13027 mRNA_4659 0.53 -0.1
712,599 + 13027 mRNA_4659 0.84 0.2
712,884 - -1.4
712,901 - 0.4
712,918 - -0.4
712,932 + -0.9
713,060 + -0.0
713,213 + 0.1
713,215 + -0.3
713,216 - 0.4
713,216 - -1.3
713,223 + 1.6
713,225 - 0.7
713,239 + -1.3
713,244 - 0.1
713,249 - -0.0
713,249 - -0.4
713,301 + 1.2
713,303 + 0.9
713,312 - -1.5
713,326 - 1.1
713,328 - -0.2
713,329 - -0.9
713,331 + 0.6
713,331 + 0.1
713,341 + -0.4
713,348 - -0.8
713,351 + 1.8
713,360 - -0.2
713,367 + -1.2
713,382 - 0.7
713,391 + 1.7
713,487 - 1.1
713,523 - 0.8
713,530 - -0.3
713,695 - -0.4
713,990 - 13028 mRNA_4660 0.16 -2.9
714,137 + 13028 mRNA_4660 0.21 -0.4