Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4656

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4655: 13023 - K03124 TFIIB, GTF2B, SUA7, tfb transcription initiation factor TFIIB, at 700768 to 702328 13023 mRNA_4656: 13024 - Hypothetical Protein, at 702586 to 704357 13024 mRNA_4657: 13025 - Hypothetical Protein, at 704703 to 705380 13025

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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702,336 + -0.6
702,359 + -0.2
702,523 + -0.1
702,565 + 0.4
702,674 - 0.1
702,820 - 13024 mRNA_4656 0.13 0.1
702,927 - 13024 mRNA_4656 0.19 2.0
702,936 + 13024 mRNA_4656 0.20 1.8
703,098 - 13024 mRNA_4656 0.29 0.4
703,257 + 13024 mRNA_4656 0.38 -2.4
703,814 + 13024 mRNA_4656 0.69 -0.9
703,958 + 13024 mRNA_4656 0.77 0.9
703,960 + 13024 mRNA_4656 0.78 1.5
704,411 - -0.6
704,422 - 0.4
704,548 - 0.3
704,559 - -1.0
704,562 + 2.6
704,569 - 0.5
704,580 + -2.3
704,848 + 13025 mRNA_4657 0.21 0.9
705,128 - 13025 mRNA_4657 0.63 -0.7
705,134 + 13025 mRNA_4657 0.64 0.7
705,148 - 13025 mRNA_4657 0.66 -0.5
705,160 + 13025 mRNA_4657 0.67 2.8