Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4641

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4640: 13008 - KOG1399 Flavin-containing monooxygenase, at 666733 to 668799 13008 mRNA_4641: 13009 - KOG1161 Protein involved in vacuolar polyphosphate accumulation, contains SPX domain, at 669193 to 672697 13009

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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668,314 + 13008 mRNA_4640 0.76 -4.3
668,398 - 13008 mRNA_4640 0.81 -0.3
668,592 + 13008 mRNA_4640 0.90 -0.4
668,746 - 0.6
668,747 - 0.1
668,878 + 0.2
668,898 - -0.2
669,789 + 13009 mRNA_4641 0.17 1.8
670,057 + 13009 mRNA_4641 0.25 -1.1
670,183 - 13009 mRNA_4641 0.28 -0.0
672,268 + 13009 mRNA_4641 0.88 -3.4
672,701 - -0.6
672,717 - 0.2
672,822 - -0.2
672,827 - 0.4
672,827 - 1.2
672,827 - 0.3
672,831 - -0.9
672,836 + -0.0
672,839 - 0.3
672,858 - -0.7
672,860 + 0.3
672,860 + 1.5
672,864 - -0.1
672,873 - -0.5
672,899 + 0.2
673,014 + -0.8
673,025 + 0.5
673,038 + -0.5
673,139 - 1.7
673,399 - 0.2
673,457 + 0.9