Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4624

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4623: 12991 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 625237 to 628203 12991 mRNA_4624: 12992 - Hypothetical Protein, at 628501 to 629051 12992 mRNA_4625: 12993 - K09660 MPDU1 mannose-P-dolichol utilization defect 1, at 629352 to 630709 12993

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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628,098 + -0.8
628,566 + 12992 mRNA_4624 0.12 0.4
628,844 + 12992 mRNA_4624 0.62 -0.1
629,233 - 1.5
629,248 + 0.2
629,258 - 1.9
629,269 - -0.3
629,273 + -1.4
629,409 + 0.0
629,413 + -3.7
629,684 + 12993 mRNA_4625 0.24 0.4
629,823 - 12993 mRNA_4625 0.35 -2.9