Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4547

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4547: 12915 - ProSiteProfiles-SET domain profile.-PS50280,SUPERFAMILY--SSF82199, at 432456 to 433199 12915 mRNA_4548: 12916 - K03392 ACMSD aminocarboxymuconate-semialdehyde decarboxylase, at 433580 to 435269 12916

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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431,927 - 2.0
432,512 + 1.3
432,533 + 12915 mRNA_4547 0.10 2.3
432,801 - 12915 mRNA_4547 0.46 2.4
433,111 - 12915 mRNA_4547 0.88 0.3
433,145 + 0.4
433,258 - 0.4
433,270 - -1.6
433,699 - -0.7
433,836 - 12916 mRNA_4548 0.15 -0.1
433,836 - 12916 mRNA_4548 0.15 1.2
433,857 + 12916 mRNA_4548 0.16 1.6
434,009 - 12916 mRNA_4548 0.25 -0.5
434,157 + 12916 mRNA_4548 0.34 -1.0