Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4498

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4497: 12865 - SUPERFAMILY--SSF81383, at 320556 to 322046 12865 mRNA_4498: 12866 - Hypothetical Protein, at 322589 to 323741 12866 mRNA_4499: 12867 - K01968 E6.4.1.4A 3-methylcrotonyl-CoA carboxylase alpha subunit, at 323884 to 327513 12867

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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321,590 - 12865 mRNA_4497 0.69 2.6
321,880 + 12865 mRNA_4497 0.89 -1.6
321,914 - -0.5
322,028 - 0.2
322,035 - 0.0
322,050 + 0.9
322,103 - 0.1
322,123 + -1.2
322,423 - 0.1
322,674 + -0.6
323,270 + 12866 mRNA_4498 0.59 0.1
323,316 - 12866 mRNA_4498 0.63 -0.7
323,421 + 12866 mRNA_4498 0.72 -0.5
323,656 + -1.1
324,329 - 12867 mRNA_4499 0.12 1.1
324,333 - 12867 mRNA_4499 0.12 -0.6
324,393 - 12867 mRNA_4499 0.14 2.0
324,557 - 12867 mRNA_4499 0.19 0.3
324,563 + 12867 mRNA_4499 0.19 -0.3