Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4493

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4492: 12860 - KOG1198 Zinc-binding oxidoreductase, at 307905 to 309384 12860 mRNA_4493: 12861 - SUPERFAMILY--SSF52047, at 309576 to 311024 12861 mRNA_4494: 12862 - SUPERFAMILY--SSF52047, at 311321 to 312953 12862

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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308,597 + 12860 mRNA_4492 0.47 -0.1
308,736 + 12860 mRNA_4492 0.56 0.3
308,803 - 12860 mRNA_4492 0.61 -0.3
308,898 - 12860 mRNA_4492 0.67 0.4
308,940 + 12860 mRNA_4492 0.70 -1.9
309,032 + 12860 mRNA_4492 0.76 0.0
309,087 + 12860 mRNA_4492 0.80 -1.2
309,227 + 12860 mRNA_4492 0.89 0.9
309,337 + 0.6
309,499 - 0.7
309,513 - -0.6
309,636 - 0.1
309,693 + -1.4
309,766 + 12861 mRNA_4493 0.13 0.1
310,345 - 12861 mRNA_4493 0.53 1.6
310,463 - 12861 mRNA_4493 0.61 0.2
310,789 - 12861 mRNA_4493 0.84 0.9
311,111 - 0.3
311,249 + -0.0
311,565 + 12862 mRNA_4494 0.15 0.3
311,654 - 12862 mRNA_4494 0.20 0.6
311,734 - 12862 mRNA_4494 0.25 -0.8