Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4442

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4441: 12809 - SUPERFAMILY--SSF52047, at 187082 to 188392 12809 mRNA_4442: 12810 - SUPERFAMILY--SSF52047, at 188576 to 190157 12810 mRNA_4443: 12811 - SUPERFAMILY--SSF52047, at 190783 to 192210 12811

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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187,745 - 12809 mRNA_4441 0.51 0.3
187,930 + 12809 mRNA_4441 0.65 -0.9
187,960 + 12809 mRNA_4441 0.67 0.1
188,045 - 12809 mRNA_4441 0.73 -0.9
188,052 + 12809 mRNA_4441 0.74 -1.0
188,175 - 12809 mRNA_4441 0.83 1.4
188,176 + 12809 mRNA_4441 0.83 0.9
188,394 + 1.5
188,490 + -0.7
188,500 - 1.0
188,522 + -1.6
188,641 - -0.5
188,659 + 1.4
188,666 - -0.5
188,669 + -0.2
188,829 + 12810 mRNA_4442 0.16 -2.7
188,920 - 12810 mRNA_4442 0.22 1.5
188,990 + 12810 mRNA_4442 0.26 -0.2
189,045 - 12810 mRNA_4442 0.30 -1.4
189,051 + 12810 mRNA_4442 0.30 0.2
189,108 + 12810 mRNA_4442 0.34 0.4
189,231 + 12810 mRNA_4442 0.41 -2.0
189,264 - 12810 mRNA_4442 0.43 -0.6
189,375 + 12810 mRNA_4442 0.51 1.2
189,382 - 12810 mRNA_4442 0.51 0.4
189,538 - 12810 mRNA_4442 0.61 -1.4
189,545 + 12810 mRNA_4442 0.61 -0.4
189,768 - 12810 mRNA_4442 0.75 1.1
190,430 + 0.5
190,442 + -0.6
190,529 - -0.1
190,540 - -0.8
190,546 - -0.2
190,549 + 0.3
190,686 - -1.8
190,701 + -0.8