Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4431

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4430: 12798 - KOG0322 G-protein beta subunit-like protein GNB1L, contains WD repeats, at 167017 to 168895 12798 mRNA_4431: 12799 - Hypothetical Protein, at 169143 to 170784 12799

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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168,949 - 1.0
168,982 + -1.8
169,034 + 1.0
169,108 - 2.4
169,125 + -0.8
169,128 - -0.3
169,166 - 0.7
169,170 - -1.4
169,381 + 12799 mRNA_4431 0.14 1.2
169,413 - 12799 mRNA_4431 0.16 -0.3
169,542 - 12799 mRNA_4431 0.24 0.9
169,546 + 12799 mRNA_4431 0.25 -2.8
169,548 - 12799 mRNA_4431 0.25 -2.9
169,563 - 12799 mRNA_4431 0.26 0.2
169,840 + 12799 mRNA_4431 0.42 0.1
170,026 + 12799 mRNA_4431 0.54 2.4
170,304 + 12799 mRNA_4431 0.71 -0.0
170,340 - 12799 mRNA_4431 0.73 -0.4
170,438 - 12799 mRNA_4431 0.79 -0.6
170,438 - 12799 mRNA_4431 0.79 0.5
170,438 - 12799 mRNA_4431 0.79 -0.7
170,718 - -1.0
170,774 - -1.0
171,015 - 0.2
171,051 - 0.0
171,056 + 0.0
171,067 + -0.8
171,219 + -0.3
171,617 + 0.8