Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4418

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4417: 12785 - Hypothetical Protein, at 136437 to 137903 12785 mRNA_4418: 12786 - KOG3683 Uncharacterized conserved protein, at 138075 to 139542 12786 mRNA_4419: 12787 - K11121 SIR2 NAD-dependent histone deacetylase SIR2, at 139865 to 142182 12787

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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137,161 + 12785 mRNA_4417 0.49 -0.3
137,185 + 12785 mRNA_4417 0.51 -0.6
137,188 - 12785 mRNA_4417 0.51 -0.5
137,191 + 12785 mRNA_4417 0.51 -1.8
137,312 + 12785 mRNA_4417 0.60 -3.0
137,420 + 12785 mRNA_4417 0.67 -1.3
137,610 + 12785 mRNA_4417 0.80 -0.7
137,697 - 12785 mRNA_4417 0.86 -2.6
138,161 + -1.2
138,304 + 12786 mRNA_4418 0.16 -2.5
138,318 + 12786 mRNA_4418 0.17 1.4
138,573 + 12786 mRNA_4418 0.34 -1.3
138,733 + 12786 mRNA_4418 0.45 -0.4
138,774 + 12786 mRNA_4418 0.48 -0.3
138,821 - 12786 mRNA_4418 0.51 -2.3
138,825 + 12786 mRNA_4418 0.51 1.0
139,579 - 2.1
139,611 + 0.3
139,626 + -0.9
139,751 + -0.7
139,756 + 1.0
139,795 + 0.1
139,896 - 0.5
139,897 - 1.0
139,935 - -0.1
140,060 - -1.2
140,102 + 12787 mRNA_4419 0.10 1.6
140,110 - 12787 mRNA_4419 0.11 -0.9
140,355 + 12787 mRNA_4419 0.21 0.9
140,509 - 12787 mRNA_4419 0.28 1.7