Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4405

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4404: 12772 - HMMPfam-Fatty acid hydroxylase superfamily-PF04116, at 103053 to 104397 12772 mRNA_4405: 12773 - K05925 METTL3_14 mRNA (2'-O-methyladenosine-N6-)-methyltransferase, at 105098 to 106781 12773 mRNA_4406: 12774 - KOG2100 Dipeptidyl aminopeptidase, at 106855 to 109155 12774

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
104,186 - 12772 mRNA_4404 0.84 0.6
104,467 + -0.4
104,484 - 0.1
104,505 - 0.1
104,524 + 0.1
104,529 - 0.4
104,536 - -0.4
104,639 - 0.1
104,641 - -0.7
104,641 - -0.4
104,661 - -0.0
104,662 - -0.7
104,756 - 0.0
104,937 - 0.7
104,978 + 0.4
105,098 - -0.7
105,112 + 1.2
105,295 + 12773 mRNA_4405 0.12 1.3
105,395 - 12773 mRNA_4405 0.18 0.4
105,528 + 12773 mRNA_4405 0.26 0.9
105,533 - 12773 mRNA_4405 0.26 -0.3
105,559 + 12773 mRNA_4405 0.27 0.2
106,274 - 12773 mRNA_4405 0.70 0.5
106,391 + 12773 mRNA_4405 0.77 1.5
106,440 + 12773 mRNA_4405 0.80 1.0
106,606 + 12773 mRNA_4405 0.90 0.3
106,843 - -0.5
107,151 + 12774 mRNA_4406 0.13 -0.4
107,279 - 12774 mRNA_4406 0.18 0.1
107,298 - 12774 mRNA_4406 0.19 2.0
107,298 + 12774 mRNA_4406 0.19 0.6
107,422 + 12774 mRNA_4406 0.25 -0.9
107,487 - 12774 mRNA_4406 0.27 0.1
107,531 + 12774 mRNA_4406 0.29 -0.5
107,762 - 12774 mRNA_4406 0.39 1.0