Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4390

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4389: 12757 - K10735 GINS4, SLD5 GINS complex subunit 4, at 74390 to 75580 12757 mRNA_4390: 12758 - K16261 YAT yeast amino acid transporter, at 76292 to 78680 12758 mRNA_4391: 12759 - Hypothetical Protein, at 79565 to 80188 12759

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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75,647 - -0.3
75,673 - 0.2
75,756 - 0.5
75,776 + 1.3
75,797 - 1.0
75,811 + 0.1
75,811 + -1.1
75,913 + 1.1
75,920 + 1.5
75,930 + 1.6
75,933 + -0.2
75,946 - -0.3
75,955 + -0.5
75,962 + 0.5
76,090 + -0.5
76,093 - 0.8
76,098 - 0.6
76,107 + 0.2
76,125 - 0.2
76,137 - 0.3
76,142 + 0.1
76,268 + 0.2
76,408 - 0.9
76,428 + 0.4
76,430 - 1.5
76,593 + 12758 mRNA_4390 0.13 0.4
76,689 - 12758 mRNA_4390 0.17 0.6
76,990 - 12758 mRNA_4390 0.29 3.8
77,430 + 12758 mRNA_4390 0.48 0.9
77,439 - 12758 mRNA_4390 0.48 0.6
78,346 - 12758 mRNA_4390 0.86 -0.3
79,368 + -0.3
79,638 - 12759 mRNA_4391 0.12 -0.4